The detailed information of tRNA gene sequence


Sequence ID>SRA1001684
Genome IDSRR001081.21808
Search identical group
Phylum/ClassCoral Stressors, viral fraction from whole Porites compressa tissue extracts; a reduced pH stressor experiment (SRP000169)
Species
Start position on genome 92
End posion on genome 2
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
acagagtttt
tRNA gene sequence 
GGACCGGTGGCCAGAGTGGACGAAGGCGTCGGATTCTTAATCCGAAGGGCGAAAGCCCCG
ACCGTGGGTTCGAATCCCACCCGGTCCTCCA
Downstream region at tRNA end position 
annnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001684	Lys	CTT
                   t      TCCA annnnnnnnn
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T G A G        G      | | | | |     G
  G         A C C G       G T G G G     C
  G           | | |                 T T
  A         A G G C
    C G A          G     AGGGCGAAAGCCCCGACC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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