The detailed information of tRNA gene sequence


Sequence ID>SRA1001688
Genome IDSRR001082.18942
Search identical group
Phylum/ClassCoral Stressors, viral fraction from whole Porites compressa tissue extracts; a nutrient stressor experiment (SRP000170)
Species
Start position on genome 76
End posion on genome 2
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
gagaagaagT
tRNA gene sequence 
AATGGAGTAGCTCAGTTGGTAGAGCGCTGGATTGTAGTTCCAGAGGACGGGAGTTCGAGT
CTCTTCTCCGTGAAan
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001688	Tyr	GTA
                   T      AAan nnnnnnnnnn
                     A   G
                     A - T
                     T + G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T T C T C     A
      T G A        A      + + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGAC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       T
                  T       G
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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