The detailed information of tRNA gene sequence


Sequence ID>SRA1001694
Genome IDSRR001088.66586
Search identical group
Phylum/ClassCoral Stressors, microbial fraction from whole Porites compressa tissue extracts; a nutrient stressor experiment (SRP000176)
Species
Start position on genome 92
End posion on genome 17
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
tctttacgtT
tRNA gene sequence 
GTCTCCGTGGCGCAATCGGTTAGCGCGTTCGGCTGTTAACCGAAAGGTTGGTGGTTCAAG
CCCACCCGGGGACGGaa
Downstream region at tRNA end position 
ctttttttcc
Secondary structure (Cloverleaf model)
>SRA1001694	Asn	GTT
                   T      GGaa ctttttttcc
                     G - C
                     T - A
                     C - G
                     T + G
                     C - G
                     C - G
                     G - C          C G
                    T     C C A C C     A
      T A A        G      | | | | |     A
    C       C G C G       G G T G G     C
    G       | | | |                 T T
    G       G C G C
      T T A        G     AGGTT
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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