The detailed information of tRNA gene sequence


Sequence ID>SRA1001701
Genome IDSRR001308.4483
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 180
End posion on genome 105
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ccttttcagg
tRNA gene sequence 
GCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACT
CCTATTATCGGCACCA
Downstream region at tRNA end position 
ttaaaatcaa
Secondary structure (Cloverleaf model)
>SRA1001701	Thr	CGT
                   g      ACCA ttaaaatcaa
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     A - T          T C
                    T     T A T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G   A
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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