The detailed information of tRNA gene sequence


Sequence ID>SRA1001702
Genome IDSRR001308.4697
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 88
End posion on genome 175
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttagaagctc
tRNA gene sequence 
GGAGAGATGGCAGAGCGGTTTAATGCGGCGGTCTTGAAAACCGTTGAGGGTCAAACCTCC
GGGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttttcggcta
Secondary structure (Cloverleaf model)
>SRA1001702	Ser	TGA
                   c      GCCA ttttcggcta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      T T A        G     TGAGGGTCAAACCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK