The detailed information of tRNA gene sequence


Sequence ID>SRA1001709
Genome IDSRR001308.8986
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 14
End posion on genome 90
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tcgccctagt
tRNA gene sequence 
CGGGGCGTGGCTCAGCCTGGTAGAGCGCTCGGTTCGGGACCGAGAGGTCGGAGGTTCGAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
acaagttttt
Secondary structure (Cloverleaf model)
>SRA1001709	Pro	CGG
                   t      ACCA acaagttttt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        G      + | | | |     G
    C       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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