The detailed information of tRNA gene sequence


Sequence ID>SRA1001712
Genome IDSRR001308.10248
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 64
End posion on genome 146
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
ctcagtatct
tRNA gene sequence 
GCGGGCGTGGTGGAATTGGTAGACACGTACGATTCAGGGTCGTATGCGAAAGCGTGAAGG
TTCGAGTCCTTTCGCCCGCACCA
Downstream region at tRNA end position 
gtcccaaata
Secondary structure (Cloverleaf model)
>SRA1001712	Leu	CAG
                   t      ACCA gtcccaaata
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T T T C C     A
      T A A        G      + | | | |     G
    T       G G T G       G A A G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGCGAAAGCGT
                    T - A
                    A - T
                    C - G
                    G - C
                    A - T
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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