The detailed information of tRNA gene sequence


Sequence ID>SRA1001713
Genome IDSRR001308.10269
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 83
End posion on genome 8
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tattcaaagc
tRNA gene sequence 
GCGATCTTAGCTCAGTTGGTAGAGTACTTGCATGACATGCAAGGTGTCACAGGTTCAAGT
CCTGTAGGTCGCACCA
Downstream region at tRNA end position 
attttctnnn
Secondary structure (Cloverleaf model)
>SRA1001713	Val	GAC
                   c      ACCA attttctnnn
                     G - C
                     C - G
                     G - C
                     A - T
                     T + G
                     C - G
                     T - A          T G
                    T     T G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C A G G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     GTGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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