The detailed information of tRNA gene sequence


Sequence ID>SRA1001716
Genome IDSRR001308.11257
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 117
End posion on genome 191
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
atgtcgcgga
tRNA gene sequence 
CGGGGTGTAGCTCAGCTTGGTAGAGCGCTTGCCTTGGGCGCAAGAGGTCGTCGGTTCGAA
TCCGGCCACCCCGACtc
Downstream region at tRNA end position 
gttccccaac
Secondary structure (Cloverleaf model)
>SRA1001716	Pro	TGG
                   a      ACtc gttccccaac
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G G C C     A
      C G A        A      | + | | |     G
    T       C T C G       G T C G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  C       C
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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