The detailed information of tRNA gene sequence


Sequence ID>SRA1001721
Genome IDSRR001308.13754
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 93
End posion on genome 168
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
actatttcac
tRNA gene sequence 
AGGGGTATGGTGTCAATGGTTAGCATGGAGGTCTCCAAAACCTTAGGTCCGGGTTCGAGT
CCTGGTACCCCTGCCA
Downstream region at tRNA end position 
ttgaaattta
Secondary structure (Cloverleaf model)
>SRA1001721	Trp	CCA
                   c      GCCA ttgaaattta
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T G
                    T     G G T C C     A
      A A C        G      | | + | |     G
    T       T G T G       C C G G G     C
    G       + | | +                 T T
    G       G C A T
      T T A        G     AGGT
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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