The detailed information of tRNA gene sequence


Sequence ID>SRA1001725
Genome IDSRR001308.16870
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 31
End posion on genome 105
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gggactatat
tRNA gene sequence 
AGGGGCATAGTACAACGGTTAGTATAGCGGTCTCCAAAACCGTAGATTGAGGTTCGATTC
CTCATGCCCCTGCCA
Downstream region at tRNA end position 
atcataagca
Secondary structure (Cloverleaf model)
>SRA1001725	Trp	CCA
                   t      GCCA atcataagca
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T T
                    T     A C T C C     A
      C A A        A      | | | | |     G
    G       C A T G       T G A G G     C
    G       | | | +                 T T
    T       G T A T
      T A          A     AGAT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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