The detailed information of tRNA gene sequence


Sequence ID>SRA1001728
Genome IDSRR001308.18290
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 71
End posion on genome -1
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gcttcccgac
tRNA gene sequence 
GGCGCGTTCGTCTATCGGCTAGGACACGGCCCTCTCAAGGCTGAAAGACGGGTTCGATTC
CCGTACGCGCTNNnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001728	Glu	CTC
                   c      NNnn nnnnnnnnnn
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     T - A          T T
                    T     T G C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    C       G G A C
      T A          A     AAAG
                    C - G
                    G + T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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