The detailed information of tRNA gene sequence


Sequence ID>SRA1001731
Genome IDSRR001308.20936
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 97
End posion on genome 189
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaacagcctc
tRNA gene sequence 
GGAGACTTGCCCGAGAGGCCGAAGGGGCTCCCCTGCTAAGGGAGTATGGGGTCAAAAGCT
CCATCGAGGGTTCGAATCCCTCAGTCTCCGCCA
Downstream region at tRNA end position 
cctggctgct
Secondary structure (Cloverleaf model)
>SRA1001731	Ser	GCT
                   c      GCCA cctggctgct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     T - A          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      C G A        G     TATGGGGTCAAAAGCTCCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK