The detailed information of tRNA gene sequence


Sequence ID>SRA1001732
Genome IDSRR001308.21052
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 203
End posion on genome 127
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tcagctcagc
tRNA gene sequence 
GGAGTGGTAGTTCAGTCGGTTAGAATGCTGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCCACTCCGCCA
Downstream region at tRNA end position 
ttttcattcg
Secondary structure (Cloverleaf model)
>SRA1001732	Asp	GTC
                   c      GCCA ttttcattcg
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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