The detailed information of tRNA gene sequence


Sequence ID>SRA1001733
Genome IDSRR001308.21660
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 161
End posion on genome 235
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ggggctcact
tRNA gene sequence 
GCCCCCGTAGCTCAGTTGGATAGAGCGTCCCCCTCCTAAGGGGAAGGTCGCACGTTCGAA
TCGTGTCGGGGGCGCgc
Downstream region at tRNA end position 
cactttctgg
Secondary structure (Cloverleaf model)
>SRA1001733	Arg	CCT
                   t      GCgc cactttctgg
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G T G C     A
      T G A        A      + | | | |     G
    T       C T C G       G C A C G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGTC
                    T - A
                    C - G
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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