The detailed information of tRNA gene sequence


Sequence ID>SRA1001734
Genome IDSRR001308.21795
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 17
End posion on genome 88
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atagtaccaa
tRNA gene sequence 
TCCGCAATAGTATAGTGGCTATTATCCCTGCCTGTCACGCAGGAGACCCGAGTTCAATTC
TCGGTTGCGGAGgtt
Downstream region at tRNA end position 
tttattttta
Secondary structure (Cloverleaf model)
>SRA1001734	Asp	GTC
                   a      Ggtt tttattttta
                     T - A
                     C - G
                     C - G
                     G - C
                     C - G
                     A - T
                     A - T          T T
                    T     G G C T C     A
      T G A        A      | | | | |     A
    G       T A T G       C C G A G     C
    G         | | +                 T T
    C       T T A T
      T A          C     AGAC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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