The detailed information of tRNA gene sequence


Sequence ID>SRA1001739
Genome IDSRR001308.22659
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 257
End posion on genome 184
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gaaaagtttt
tRNA gene sequence 
AGGCCTGTAGTTTAATGGTAGAACTAGGATCTCCAAAGTCCTTGGTGGGAGTTCGATTCT
CTCCGGGCCTGCCA
Downstream region at tRNA end position 
agtggctagt
Secondary structure (Cloverleaf model)
>SRA1001739	Trp	CCA
                   t      GCCA agtggctagt
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T T
                    T     C T C T C     A
        A A        A      | + | | |     G
      T     T T T G       G G G A G     C
      G     + | | |                 T T
      G     G A A C
        T A        T     TGGT
                    A - T
                    G - C
                    G - C
                    A - T
                    T + G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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