The detailed information of tRNA gene sequence


Sequence ID>SRA1001743
Genome IDSRR001308.24866
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 100
End posion on genome 175
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
gggtgttcgc
tRNA gene sequence 
GGCTCCGTAGCTCAGAGGATAGAGCGCCTCCGTCCTAAGGAGGGCGTCGGGGGTTCGATT
CCCTCCGGGGCCGCCA
Downstream region at tRNA end position 
ctgatttgaa
Secondary structure (Cloverleaf model)
>SRA1001743	Arg	CCT
                   c      GCCA ctgatttgaa
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     C - G
                     G - C          T T
                    T     C T C C C     A
      A G A        A      | + | | |     G
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    A       G A G C
      T A          G     GCGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  G       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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