The detailed information of tRNA gene sequence


Sequence ID>SRA1001744
Genome IDSRR001308.25028
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 184
End posion on genome 256
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gcctttgttc
tRNA gene sequence 
GGGGCGTTAGCGCAGTTGGTAGCGCGCTTCAATGGCATTGAAGAGGTCACGAGTTCGACT
CTCGTACGCTCCAaat
Downstream region at tRNA end position 
ttttgacgtc
Secondary structure (Cloverleaf model)
>SRA1001744	Ala	GGC
                   c      Aaat ttttgacgtc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    T     T G C T C     A
      T G A        A      | | | | |     G
    T       C G C G       A C G A G     C
    G       | | | |                 T T
    G       G C G C
      T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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