The detailed information of tRNA gene sequence


Sequence ID>SRA1001754
Genome IDSRR001308.33122
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 102
End posion on genome 31
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
caataatcta
tRNA gene sequence 
GGTTCGTTGGTCAATTGGTTAAGACGTAGGACTTTCAATCCTGAATAATGGGTTCGATTC
CCATACGAACTAttg
Downstream region at tRNA end position 
tgtttttaaa
Secondary structure (Cloverleaf model)
>SRA1001754	Glu	TTC
                   a      Attg tgtttttaaa
                     G + T
                     G - C
                     T - A
                     T - A
                     C - G
                     G - C
                     T - A          T T
                    T     T A C C C     A
      T T A        G      | | | | |     G
    G       A C T G       A T G G G     C
    G         | | |                 T T
    T       A G A C
      T A          G     AATA
                    T + G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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