The detailed information of tRNA gene sequence


Sequence ID>SRA1001755
Genome IDSRR001308.33363
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 86
End posion on genome 161
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaataaccac
tRNA gene sequence 
AGGCGCGTAGCTCAATTGGTAGAGTAGCGGTCTCCAAAACCGTTGGTTGGGGGTTCGATT
CCCTCCGCGCCTGCCA
Downstream region at tRNA end position 
cttccgcttc
Secondary structure (Cloverleaf model)
>SRA1001755	Trp	CCA
                   c      GCCA cttccgcttc
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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