The detailed information of tRNA gene sequence


Sequence ID>SRA1001758
Genome IDSRR001308.35825
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 105
End posion on genome 20
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gacatgaatT
tRNA gene sequence 
GGCCGGATGGCGAAACTGGCAGACGCACAGGACTTAAAATCCTGTATCCGTAAGGGTGTG
CGGGTTCGAGCCCCGCTCCGGCTAAtg
Downstream region at tRNA end position 
agttacgttg
Secondary structure (Cloverleaf model)
>SRA1001758	Leu	TAA
                   T      AAtg agttacgttg
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          C G
                    T     C G C C C     A
      C A A        G      | | | | |     G
    T       A G C G       G C G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        A     TATCCGTAAGGGTGT
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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