The detailed information of tRNA gene sequence


Sequence ID>SRA1001760
Genome IDSRR001308.37809
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 39
End posion on genome 112
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
taccaacaac
tRNA gene sequence 
GACTCGTTGGTCTAATGGAATGGCAGTGGTCTGCAAAACCGCAGGAACGGGTTCGATTCC
CGTACGAGTCTCCA
Downstream region at tRNA end position 
gacgaatcgt
Secondary structure (Cloverleaf model)
>SRA1001760	Cys	GCA
                   c      TCCA gacgaatcgt
                     G - C
                     A - T
                     C - G
                     T - A
                     C - G
                     G - C
                     T - A          T T
                    T     T G C C C     A
        A A        G      | | | | |     G
      T     T C T G       A C G G G     C
      G       | + |                 T T
      G     T G G C
        A A        A     AGGA
                    G - C
                    T + G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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