The detailed information of tRNA gene sequence


Sequence ID>SRA1001761
Genome IDSRR001308.40121
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 113
End posion on genome 184
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ttgtaacagc
tRNA gene sequence 
GCCGGTATAGCTTAGTGGTAGAGCATTTGCCTTGTAAGTAAAAGGTCGTGGGTTCAACTC
CCACTATCGGCTttt
Downstream region at tRNA end position 
ttattaactt
Secondary structure (Cloverleaf model)
>SRA1001761	Thr	TGT
                   c      Tttt ttattaactt
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T
                     T - A
                     A - T          T C
                    T     C A C C C     A
        G A        A      | | | | |     A
      T     T T C G       G T G G G     C
      G     + | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    T - A
                    T - A
                    T - A
                    G + T
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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