The detailed information of tRNA gene sequence


Sequence ID>SRA1001762
Genome IDSRR001308.40420
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 99
End posion on genome 26
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
agcgcagcac
tRNA gene sequence 
GCCGCCTTAGCTCAGTCGGTAGAGCGATTCACTCGTAATGAATAGGTCAGGGGTTCGATT
CCCCTAGGCGGCTCag
Downstream region at tRNA end position 
aaagagcagg
Secondary structure (Cloverleaf model)
>SRA1001762	Thr	CGT
                   c      TCag aaagagcagg
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      T G A        A      | | | | |     G
    C       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    T - A
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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