The detailed information of tRNA gene sequence


Sequence ID>SRA1001769
Genome IDSRR001308.44453
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 276
End posion on genome 200
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
nnccgcccac
tRNA gene sequence 
GTCCCCGTAGCTCAGCCGGATAGAGCAGCGGTTTCCTAAACCGGAGGTCGGAGGTTCGAA
TCCTCTCGGGGACGCCA
Downstream region at tRNA end position 
gaatccgcgg
Secondary structure (Cloverleaf model)
>SRA1001769	Arg	CCT
                   c      GCCA gaatccgcgg
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    G   G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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