The detailed information of tRNA gene sequence


Sequence ID>SRA1001786
Genome IDSRR001308.52523
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 181
End posion on genome 105
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tttgaagaat
tRNA gene sequence 
GACGCAGTGGCGAAGAGGCCTAACGCTGCGGTTTGCAAAACCGCCATTCGCGGGTTCGAC
TCCCGCCTGCGTCTCCA
Downstream region at tRNA end position 
gatgttgctt
Secondary structure (Cloverleaf model)
>SRA1001786	Cys	GCA
                   t      TCCA gatgttgctt
                     G - C
                     A - T
                     C - G
                     G - C
                     C - G
                     A - T
                     G - C          T C
                    T     C G C C C     A
      A G A        G      | | | | |     G
    G       A G C G       G C G G G     C
    G         | | |                 T T
    C       A C G C
      C T A        T     CATTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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