The detailed information of tRNA gene sequence


Sequence ID>SRA1001793
Genome IDSRR001308.58355
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 111
End posion on genome 36
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ccaccaaaaA
tRNA gene sequence 
GAACCAATAGCTCAGTTGGTTAGAGCGTGTAGCTGTTAACTATAAGGTCATCGGTTCAAA
TCCGATTTGGTTCTAat
Downstream region at tRNA end position 
ttgctaagtt
Secondary structure (Cloverleaf model)
>SRA1001793	Asn	GTT
                   A      TAat ttgctaagtt
                     G - C
                     A - T
                     A - T
                     C - G
                     C - G
                     A - T
                     A - T          T A
                    T     T A G C C     A
      T G A        A      | | | | |     A
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    G + T
                    T - A
                    A - T
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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