The detailed information of tRNA gene sequence


Sequence ID>SRA1001795
Genome IDSRR001308.58516
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 167
End posion on genome 250
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ggaacggcac
tRNA gene sequence 
GGCAGGTTGCCCGAGCGGCCAAAGGGAGCGGACTGTAAATCCGTCGCGCAAGCTACATAG
GTTCGAATCCTATACCTGCCACAA
Downstream region at tRNA end position 
cgtggtcact
Secondary structure (Cloverleaf model)
>SRA1001795	Tyr	GTA
                   c      ACAA cgtggtcact
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     T A T C C     A
      C G A        G      | | | | |     G
    G       G C C C       A T A G G     C
    G         | | |                 T T
    C       A G G G
      C A A        A     CGCGCAAGCTAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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