The detailed information of tRNA gene sequence


Sequence ID>SRA1001796
Genome IDSRR001308.58942
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 140
End posion on genome 55
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttttaactgc
tRNA gene sequence 
GGAAGGCAAGCCAAATCGGTGTGGCAGCAGTCTTGAAAACTGCCGTGAGCAATCGCATAG
AGGTTCGAGTCCTCTACTTTCCGCCA
Downstream region at tRNA end position 
tttcaattcg
Secondary structure (Cloverleaf model)
>SRA1001796	Ser	TGA
                   c      GCCA tttcaattcg
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     G - C
                     C   A          T G
                    A     T C T C C     A
      T A A        A      | | | | |     G
    C       A C C G       A G A G G     C
    G       | | | |                 T T
    G       T G G C
      T G          A     CGTGAGCAATCGCAT
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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