The detailed information of tRNA gene sequence


Sequence ID>SRA1001797
Genome IDSRR001308.59337
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 131
End posion on genome 58
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gatgatcttg
tRNA gene sequence 
CGCGGTGTGGAGCAGTGGCTAGCTCGCCTGGCTCATAACCAGGAGGTCGCGGGTTCAAAT
CCCGTCGCCGCAACtg
Downstream region at tRNA end position 
ctgtcgtctc
Secondary structure (Cloverleaf model)
>SRA1001797	Met	CAT
                   g      ACtg ctgtcgtctc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     T G C C C     A
      T G A        G      + | | | |     A
    G       C G A G       G C G G G     C
    G       | | | |                 T T
    C       G C T C
      T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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