The detailed information of tRNA gene sequence


Sequence ID>SRA1001801
Genome IDSRR001308.61243
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 199
End posion on genome 125
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gttgtttttG
tRNA gene sequence 
GCCCCACTAGCTCAGTCGGTAGAGCGCAAGACTTCTAATCTTGAGGCCGCGGGTTCGACC
CCCGCGTGGGGTTGtg
Downstream region at tRNA end position 
tgaaacgaaa
Secondary structure (Cloverleaf model)
>SRA1001801	Arg	TCT
                   G      TGtg tgaaacgaaa
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T
                     C - G          C C
                    T     C G C C C     A
      T G A        A      | | | | |     G
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCC
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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