The detailed information of tRNA gene sequence


Sequence ID>SRA1001806
Genome IDSRR001308.65316
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 198
End posion on genome 118
Amino Acid Ser
Anticodon AGA
Upstream region at tRNA start position 
gctttttgtt
tRNA gene sequence 
GACGTTGTGACGGAGTGGTTAACGTGACCGATTAGAAATCGGTTCCTTTCGGGGGCGCAG
GTTCAAATCCTGCCAACGTCTttt
Downstream region at tRNA end position 
ttggggcttt
Secondary structure (Cloverleaf model)
>SRA1001806	Ser	AGA
                   t      Tttt ttggggcttt
                     G - C
                     A - T
                     C - G
                     G - C
                     T - A
                     T - A
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    G       G G C A       G C A G G     C
    G         | | |                 T T
    T       A C G T
      T A          G     TCCTTTCGGGGGC
                    A - T
                    C - G
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    A G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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