The detailed information of tRNA gene sequence


Sequence ID>SRA1001821
Genome IDSRR001308.72523
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 55
End posion on genome 128
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
tcagtttttt
tRNA gene sequence 
GCGGGTATAGCTCAATTGGTAGAGTCCTAGTTTTCCAAACTAGTTGTTGCCGGTTCAAAT
CCGGCTACCCGCTCtt
Downstream region at tRNA end position 
ttcggggtat
Secondary structure (Cloverleaf model)
>SRA1001821	Gly	TCC
                   t      TCtt ttcggggtat
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C G G C C     A
      T A A        A      | | | | |     A
    T       C T C G       G C C G G     C
    G       | | | +                 T T
    G       G A G T
      T A          C     TTGTT
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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