The detailed information of tRNA gene sequence


Sequence ID>SRA1001826
Genome IDSRR001308.74910
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 201
End posion on genome 128
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atgactatat
tRNA gene sequence 
ACGGGTGTAGTTCAAGGGTAGAATAGCGGTCTCCAAAACCGTTGATGGGAGTTCGAATCT
CTCCACCCGTGCAA
Downstream region at tRNA end position 
aacaaaaaaa
Secondary structure (Cloverleaf model)
>SRA1001826	Trp	CCA
                   t      GCAA aacaaaaaaa
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C T C     A
        A A        A      | + | | |     G
      G     C T T G       G G G A G     C
      G     | | | +                 T T
      G     G A A T
        T A        A     TGAT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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