The detailed information of tRNA gene sequence


Sequence ID>SRA1001827
Genome IDSRR001308.74930
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 38
End posion on genome 121
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
cccattcaat
tRNA gene sequence 
GCTCGCATGGTGGAATGGTAGACACGCTGGTCTTAGGAACCAGTGCCGCAAGGCGTGGGA
GTTCGAGTCTCTCTGCGAGCACCA
Downstream region at tRNA end position 
atttttatct
Secondary structure (Cloverleaf model)
>SRA1001827	Leu	TAG
                   t      ACCA atttttatct
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     C - G
                     A - T          T G
                    T     C T C T C     A
      T A A        G      | + | | |     G
    G       G G T G       G G G A G     C
    G         | | |                 T T
    T       A C A C
      A G          G     TGCCGCAAGGCGT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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