The detailed information of tRNA gene sequence


Sequence ID>SRA1001828
Genome IDSRR001308.75702
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 173
End posion on genome 248
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aaccgaatac
tRNA gene sequence 
GGGGCTATGGCGCAGCTGGTAGCGCACCACACTGGCAGTGTGGGGGTCAGGGGTTCGAGT
CCCCTTAGCTCCACAA
Downstream region at tRNA end position 
aacgaaccgc
Secondary structure (Cloverleaf model)
>SRA1001828	Ala	GGC
                   c      ACAA aacgaaccgc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T G
                    T     T C C C C     A
      C G A        G      | | | | |     G
    T       C G C G       A G G G G     C
    G       | | | |                 T T
    G       G C G C
      T A          A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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