The detailed information of tRNA gene sequence


Sequence ID>SRA1001830
Genome IDSRR001308.77611
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 244
End posion on genome 170
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccaagtttaa
tRNA gene sequence 
GGTCGGTTCGCCAAATGGGAAGGCTCTTGGCTGCAACCCAAACATGAGGGAGTTCGATTC
TCCCACCGACCTCCA
Downstream region at tRNA end position 
agtttgtgtg
Secondary structure (Cloverleaf model)
>SRA1001830	Cys	GCA
                   a      TCCA agtttgtgtg
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     G - C
                     T - A          T T
                    T     C C C T C     A
        A A        C      | | | | |     G
      T     A C C G       G G G A G     C
      G       | | |                 T T
      G     A G G C
        G A        T     CATGA
                    C   A
                    T - A
                    T - A
                    G - C
                    G - C
                  C       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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