The detailed information of tRNA gene sequence


Sequence ID>SRA1001836
Genome IDSRR001308.83351
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 96
End posion on genome 171
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
tctccacacg
tRNA gene sequence 
GTGGATATAGCTCAATGGTTAGAGCGCCGGTCTGTGGCACCGGAGGTTGCGGGTTCGAGT
CCCGTTATCCACCCCA
Downstream region at tRNA end position 
gattctcccc
Secondary structure (Cloverleaf model)
>SRA1001836	His	GTG
                   g      CCCA gattctcccc
                     G - C
                     T - A
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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