The detailed information of tRNA gene sequence


Sequence ID>SRA1001845
Genome IDSRR001308.87266
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 114
End posion on genome 190
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tatgcaattt
tRNA gene sequence 
CGGGGTGTAGCGCAGCCTGGTAGCGCGCTTGTTTTGGGAGCAAGATGTCGGAGGTTCGAA
TCCTCTCACCCCGACCA
Downstream region at tRNA end position 
cttgaataag
Secondary structure (Cloverleaf model)
>SRA1001845	Pro	TGG
                   t      ACCA cttgaataag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     ATGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    T + G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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