The detailed information of tRNA gene sequence


Sequence ID>SRA1001851
Genome IDSRR001308.90767
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 121
End posion on genome 197
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cacaccgtac
tRNA gene sequence 
GCGGGTGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCAAG
TCCCGTCACTCGCGCCA
Downstream region at tRNA end position 
ttttcccctg
Secondary structure (Cloverleaf model)
>SRA1001851	Asp	GTC
                   c      GCCA ttttcccctg
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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