The detailed information of tRNA gene sequence


Sequence ID>SRA1001857
Genome IDSRR001308.93829
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 173
End posion on genome 97
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaagtctac
tRNA gene sequence 
CGCGCGATGGAGCAGTCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGGAGGTTCAAA
TCCTTCTCGCGCAACCA
Downstream region at tRNA end position 
ataaagacgg
Secondary structure (Cloverleaf model)
>SRA1001857	Met	CAT
                   c      ACCA ataaagacgg
                     C   A
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T          T A
                    T     C T T C C     A
      T G A        G      | + | | |     A
    C       C G A G       G G A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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