The detailed information of tRNA gene sequence


Sequence ID>SRA1001859
Genome IDSRR001308.94559
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 192
End posion on genome 119
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
tagcacctcc
tRNA gene sequence 
TACCCCGTGGTGTAATGGTAACACAGGAGATTTTGATTCTCTCGTTCAAGGTTCGAATCC
TTGCGGGGTAACCA
Downstream region at tRNA end position 
ctcaggatgg
Secondary structure (Cloverleaf model)
>SRA1001859	Gln	TTG
                   c      ACCA ctcaggatgg
                     T - A
                     A - T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G T T C C     A
        A A        G      | | | | |     G
      T     T G T G       C A A G G     C
      G     | | | |                 T T
      G     A C A C
        T A        A     CGTT
                    G + T
                    G - C
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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