The detailed information of tRNA gene sequence


Sequence ID>SRA1001865
Genome IDSRR001308.97853
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 84
End posion on genome 173
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcaccagttc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTTAAGGCACACCCTTGCTAAGGGTGCGTAGGAGAAATCCTA
CCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
aatcattctg
Secondary structure (Cloverleaf model)
>SRA1001865	Ser	GCT
                   c      GCCA aatcattctg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        A     CGTAGGAGAAATCCTACC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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