The detailed information of tRNA gene sequence


Sequence ID>SRA1001866
Genome IDSRR001308.98015
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 274
End posion on genome 201
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tccaaagagT
tRNA gene sequence 
AAGAACATGGCGTAATTGGTAACGTATCTGCTTTGGGAGCAGATGTTATGGGTTCAAGTC
CCATTGTTCTGATag
Downstream region at tRNA end position 
atagaaattc
Secondary structure (Cloverleaf model)
>SRA1001866	Pro	TGG
                   T      ATag atagaaattc
                     A   G
                     A - T
                     G - C
                     A - T
                     A - T
                     C - G
                     A - T          T G
                    T     T A C C C     A
      T A A        G      | | | | |     A
    T       T G C G       A T G G G     C
    G       | | | +                 T T
    G       A C G T
      T A          A     TGTT
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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