The detailed information of tRNA gene sequence


Sequence ID>SRA1001872
Genome IDSRR001308.103746
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 38
End posion on genome 112
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cttactattt
tRNA gene sequence 
GACGCCATCGTCCAGTGGTTAAGACAACGGGTTTTCATCCCGTAGACCGGAGTTCAATTC
TCCGTGGCGTTACCA
Downstream region at tRNA end position 
acttgtcaat
Secondary structure (Cloverleaf model)
>SRA1001872	Glu	TTC
                   t      ACCA acttgtcaat
                     G + T
                     A - T
                     C - G
                     G - C
                     C - G
                     C - G
                     A - T          T T
                    T     G C C T C     A
      T G A        C      | | | | |     A
    G       C C T G       C G G A G     C
    G         | | |                 T T
    T       A G A C
      T A          A     AGAC
                    A - T
                    C - G
                    G - C
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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