The detailed information of tRNA gene sequence


Sequence ID>SRA1001874
Genome IDSRR001308.104077
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 102
End posion on genome 15
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
catttgacag
tRNA gene sequence 
GGAGAGATGACCGAGTGGCCGAAGGTGCACGATTGGAAATCGTGTGTGTCGCAAGGCACC
GCGGGTTCGAATCCCGCTCTCTCCGCAA
Downstream region at tRNA end position 
tcgtttcaaa
Secondary structure (Cloverleaf model)
>SRA1001874	Ser	GGA
                   g      GCAA tcgtttcaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G C G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTGTCGCAAGGCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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