The detailed information of tRNA gene sequence


Sequence ID>SRA1001875
Genome IDSRR001308.104678
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 192
End posion on genome 120
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ggggacgtga
tRNA gene sequence 
TGGGGTGTAGCTCAATGGCAGAGCGCTCGACTGTTAATCGAGTGGTTGGTGGTTCGACTC
CACCCGCCCCAGCtg
Downstream region at tRNA end position 
atgcacgata
Secondary structure (Cloverleaf model)
>SRA1001875	Asn	GTT
                   a      GCtg atgcacgata
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T C
                    T     C C A C C     A
        A A        A      | | | | |     G
      T     C T C G       G G T G G     C
      G     | | | |                 T T
      G     G A G C
        C A        G     TGGTT
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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