The detailed information of tRNA gene sequence


Sequence ID>SRA1001879
Genome IDSRR001308.106342
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 107
End posion on genome 182
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tcaaagctgt
tRNA gene sequence 
AGGCGCGTAGCTCAGGGGTTAGAGCGCCTGCTTGACACGCAGGAGGTCGGTGGTTCGAAT
CCACTCGTGCCTACCA
Downstream region at tRNA end position 
ttcgattcac
Secondary structure (Cloverleaf model)
>SRA1001879	Val	GAC
                   t      ACCA ttcgattcac
                     A - T
                     G - C
                     G - C
                     C - G
                     G + T
                     C - G
                     G - C          T A
                    T     T C A C C     A
      G G A        A      + | | | |     G
    G       C T C G       G G T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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