The detailed information of tRNA gene sequence


Sequence ID>SRA1001884
Genome IDSRR001308.108898
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 194
End posion on genome 268
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gaaattaaac
tRNA gene sequence 
GGCGCGTTGGTCAAGGGGTTAAGACGCCTCCCTTTCACGGAGGAATCACGGGTTCGATTC
CCGTACGTGCTACTA
Downstream region at tRNA end position 
aaagtaagcc
Secondary structure (Cloverleaf model)
>SRA1001884	Glu	TTC
                   c      ACTA aaagtaagcc
                     G + T
                     G - C
                     C - G
                     G + T
                     C - G
                     G - C
                     T - A          T T
                    T     T G C C C     A
      G G A        G      | | | | |     G
    G       A C T G       A C G G G     C
    G         | | |                 T T
    T       A G A C
      T A          G     AATC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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